New human genome version CHM13v2 uploaded
We added the Homo sapiens genome version CHM13 from Telomere-to-telomere consortium (https://sites.google.com/ucsc.edu/t2tworkinggroup/). The new data set provides additional sequences missing...
Blog
Another scientific paper references Persephone
A study on predicting promoters of several conifer species has been published by International Journal of Molecular Sciences (link). The...
A new feature in the desktop version: Export connector clusters as ribbons
The synteny matrix in the desktop version of Persephone that visualizes the alignment of entire genomes has a useful feature...
Omicron variant added to our collection of SARS-CoV-2 records
Yet another variant of the notorious SARS-CoV-2 coronavirus, called omicron, have been added to our records. It is available in...
Synteny matrix in the Web version
We continue migrating the features originally implemented in the desktop application to the Web version. This time, we added the...
Transcript structure comparison view added to the Web version
The gene properties form shown for a selected gene model has now a new tab, called Transcripts: This control displays alternative...
DIAMOND as a much faster alternative to BLASTP
27 October 2021
in General News
Our loader application PersephoneShell used to upload the data to the Persephone database provides commands to calculate ortholog gene pairs....
Vigna unguiculata (cowbean) genome loaded
13 September 2021
in Web Version
We have added the genome of Vigna unguiculata v1.2 (cowbean) with gene annotation to our web version of Persephone. The...
An 18-min Video Presentation On Web Persephone
Max Troukhan, Ph.D, is going to present this video talk at BiATA conference. It gives a quick overview of the...
SARS-CoV-2 Delta (The Virus from India) Loaded
The recent COVID-19 pandemic profile is changing, and now it is mostly dominated by the coronavirus strain called delta (B.1.617.2)...