The Autumn Upgrade: Minimap2 integration, SVG output and other features
Minimap2 Our next major feature upgrade of Persephone includes interesting new functions. First of all, we integrated minimap2 - a popular...
Blog
Cornell School of Integrative Plant Science licenses Persephone
Our community is growing! Cornell University's School of Integrative Plant Science licensed Persephone. Our new customer uses genomic tools to...
A Quick Video-Tutorial on Installing Persephone Using a Docker Image
The Persephone software stack includes the database, mono (to run .NET binaries on linux), the main server WebCerberus, the loader...
Three Echinochloa genomes loaded
We have added three genomes of Echinochloa grasses. These are weeds known by the common names barnyard grass or corn panic grass. In...
Four Brassica genomes loaded
We have expanded our collection by adding four Brassica genomes: Brassica rapa Fpc_v1.3, Brassica rapa Chiifu v3.5, Brassica oleracea v1.0,...
New features: highlights, export search results, and other improvements
The web version of Persephone has now a few new features. Highlights Drag the mouse while holding Ctrl key to highlight a...
Cocoa genomes added
Our system at https://web.persephonesoft.com has a couple of newly added cocoa genomes:Theobroma cacao (Criollo v2)Theobroma cacao (Matina v2) Comparing the cocoa...
Persephone can visualize modbam files
We added a new functionality to Persephone - it can now accept modbam files with base modification values commonly used...
Another Paper in Nature references Persephone
We are pleased to announce that the paper called "Pan-genome inversion index reveals evolutionary insights into the subpopulation structure of...
New feature: Inventory of tracks
The users can now control the list of available tracks for each map set. As you probably know, a track...